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BIBE
2010
IEEE
143views Bioinformatics» more  BIBE 2010»
15 years 5 months ago
The Effect of Sequence Error and Partial Training Data on BLAST Accuracy
- Metagenomics is the study of environmental samples. Because few tools exist for metagenomic analysis, a natural step has been to utilize the popular homology tool, BLAST, to sear...
Steven D. Essinger, Gail L. Rosen
GRC
2008
IEEE
15 years 5 months ago
Effects of Varying the Delay Distribution in Random, Scale-free, and Small-world Networks
Graph-theory-based approaches have been used with great success when analyzing abstract properties of natural and artificial networks. However, these approaches have not factored...
Bum Soon Jang, Timothy Mann, Yoonsuck Choe
BMCBI
2010
105views more  BMCBI 2010»
15 years 4 months ago
Effects of scanning sensitivity and multiple scan algorithms on microarray data quality
Background: Maximizing the utility of DNA microarray data requires optimization of data acquisition through selection of an appropriate scanner setting. To increase the amount of ...
Andrew Williams, Errol M. Thomson
BMCBI
2010
174views more  BMCBI 2010»
15 years 4 months ago
The effect of prior assumptions over the weights in BayesPI with application to study protein-DNA interactions from ChIP-based h
Background: To further understand the implementation of hyperparameters re-estimation technique in Bayesian hierarchical model, we added two more prior assumptions over the weight...
Junbai Wang
ESE
2006
105views Database» more  ESE 2006»
15 years 4 months ago
Replaying development history to assess the effectiveness of change propagation tools
As developers modify software entities such as functions or variables to introduce new features, enhance old ones, or fix bugs, they must ensure that other entities in the software...
Ahmed E. Hassan, Richard C. Holt