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» Using sampling methods to improve binding site predictions
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92
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BMCBI
2005
85views more  BMCBI 2005»
15 years 11 days ago
Prediction of twin-arginine signal peptides
Background: Proteins carrying twin-arginine (Tat) signal peptides are exported into the periplasmic compartment or extracellular environment independently of the classical Secdepe...
Jannick Dyrløv Bendtsen, Henrik Nielsen, Da...
117
Voted
IM
2007
15 years 1 months ago
Estimating End-to-End Performance by Collaborative Prediction with Active Sampling
— Accurately estimating end-to-end performance in distributed systems is essential both for monitoring compliance with service-level agreements (SLAs) and for performance optimiz...
Irina Rish, Gerald Tesauro
103
Voted
BIOINFORMATICS
2006
129views more  BIOINFORMATICS 2006»
15 years 16 days ago
Predicting methylation status of CpG islands in the human brain
Motivation: Over 50% of human genes contain CpG islands in their 5'-regions. Methylation patterns of CpG islands are involved in tissue-specific gene expression and regulatio...
Fang Fang, Shicai Fan, Xuegong Zhang, Michael Q. Z...
83
Voted
BMCBI
2006
74views more  BMCBI 2006»
15 years 16 days ago
An unsupervised classification scheme for improving predictions of prokaryotic TIS
Background: Although it is not difficult for state-of-the-art gene finders to identify coding regions in prokaryotic genomes, exact prediction of the corresponding translation ini...
Maike Tech, Peter Meinicke
BMCBI
2008
101views more  BMCBI 2008»
15 years 18 days ago
Reranking candidate gene models with cross-species comparison for improved gene prediction
Background: Most gene finders score candidate gene models with state-based methods, typically HMMs, by combining local properties (coding potential, splice donor and acceptor patt...
Qian Liu, Koby Crammer, Fernando C. N. Pereira, Da...