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BMCBI
2002
137views more  BMCBI 2002»
14 years 11 months ago
ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files
Background: Functional genomics involves the parallel experimentation with large sets of proteins. This requires management of large sets of open reading frames as a prerequisite ...
Konrad Büssow, Steve Hoffmann, Volker Sievert
DAGSTUHL
2009
15 years 28 days ago
Learning Highly Structured Manifolds: Harnessing the Power of SOMs
Abstract. In this paper we elaborate on the challenges of learning manifolds that have many relevant clusters, and where the clusters can have widely varying statistics. We call su...
Erzsébet Merényi, Kadim Tasdemir, Li...
WWW
2006
ACM
16 years 15 days ago
Relaxed: on the way towards true validation of compound documents
To maintain interoperability in the Web environment it is necessary to comply with Web standards. Current specifications of HTML and XHTML languages define conformance conditions ...
Jirka Kosek, Petr Nálevka
WSDM
2010
ACM
204views Data Mining» more  WSDM 2010»
15 years 6 months ago
Learning URL patterns for webpage de-duplication
Presence of duplicate documents in the World Wide Web adversely affects crawling, indexing and relevance, which are the core building blocks of web search. In this paper, we pres...
Hema Swetha Koppula, Krishna P. Leela, Amit Agarwa...
BMCBI
2010
108views more  BMCBI 2010»
14 years 12 months ago
Error, reproducibility and sensitivity : a pipeline for data processing of Agilent oligonucleotide expression arrays
Background: Expression microarrays are increasingly used to obtain large scale transcriptomic information on a wide range of biological samples. Nevertheless, there is still much ...
Benjamin Chain, Helen Bowen, John Hammond, Wilfrie...