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RECOMB
2004
Springer
15 years 10 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
ICCS
2009
Springer
15 years 4 months ago
Distinguishing Answers in Conceptual Graph Knowledge Bases
Abstract. In knowledge bases, the open world assumption and the ability to express variables may lead to an answer redundancy problem. This problem occurs when the returned answers...
Nicolas Moreau, Michel Leclère, Madalina Cr...
SDM
2007
SIAM
143views Data Mining» more  SDM 2007»
14 years 11 months ago
Less is More: Compact Matrix Decomposition for Large Sparse Graphs
Given a large sparse graph, how can we find patterns and anomalies? Several important applications can be modeled as large sparse graphs, e.g., network traffic monitoring, resea...
Jimeng Sun, Yinglian Xie, Hui Zhang, Christos Falo...
CSB
2005
IEEE
152views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Consensus Genetic Maps: A Graph Theoretic Approach
A genetic map is an ordering of genetic markers constructed from genetic linkage data for use in linkage studies and experimental design. While traditional methods have focused on...
Benjamin G. Jackson, Srinivas Aluru, Patrick S. Sc...
ADBIS
2009
Springer
151views Database» more  ADBIS 2009»
15 years 4 months ago
Rule-Based Management of Schema Changes at ETL Sources
In this paper, we visit the problem of the management of inconsistencies emerging on ETL processes as results of evolution operations g at their sources. We abstract Extract-Transf...
George Papastefanatos, Panos Vassiliadis, Alkis Si...