Biomedical literature is an important source of information for chemical compounds. However, different representations and nomenclatures for chemical entities exist, which makes th...
Tiago Grego, Piotr Pezik, Francisco M. Couto, Diet...
Background: Within the emerging field of text mining and statistical natural language processing (NLP) applied to biomedical articles, a broad variety of techniques have been deve...
— We consider the problem of finding the relevant named entities in response to a search query over a given text corpus. Entity search can readily be used to augment conventiona...
Background: Significant parts of biological knowledge are available only as unstructured text in articles of biomedical journals. By automatically identifying gene and gene produc...
Background: When term ambiguity and variability are very high, dictionary-based Named Entity Recognition (NER) is not an ideal solution even though large-scale terminological reso...
Yutaka Sasaki, Yoshimasa Tsuruoka, John McNaught, ...