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IWANN
2009
Springer
14 years 24 days ago
Identification of Chemical Entities in Patent Documents
Biomedical literature is an important source of information for chemical compounds. However, different representations and nomenclatures for chemical entities exist, which makes th...
Tiago Grego, Piotr Pezik, Francisco M. Couto, Diet...
BMCBI
2005
189views more  BMCBI 2005»
13 years 6 months ago
A sentence sliding window approach to extract protein annotations from biomedical articles
Background: Within the emerging field of text mining and statistical natural language processing (NLP) applied to biomedical articles, a broad variety of techniques have been deve...
Martin Krallinger, Maria Padron, Alfonso Valencia
WEBI
2007
Springer
14 years 11 days ago
Concordance-Based Entity-Oriented Search
— We consider the problem of finding the relevant named entities in response to a search query over a given text corpus. Entity search can readily be used to augment conventiona...
Mikhail Bautin, Steven Skiena
BMCBI
2005
125views more  BMCBI 2005»
13 years 6 months ago
A simple approach for protein name identification: prospects and limits
Background: Significant parts of biological knowledge are available only as unstructured text in articles of biomedical journals. By automatically identifying gene and gene produc...
Katrin Fundel, Daniel Güttler, Ralf Zimmer, J...
BMCBI
2008
153views more  BMCBI 2008»
13 years 6 months ago
How to make the most of NE dictionaries in statistical NER
Background: When term ambiguity and variability are very high, dictionary-based Named Entity Recognition (NER) is not an ideal solution even though large-scale terminological reso...
Yutaka Sasaki, Yoshimasa Tsuruoka, John McNaught, ...