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BMCBI
2006
136views more  BMCBI 2006»
14 years 11 months ago
EMD: an ensemble algorithm for discovering regulatory motifs in DNA sequences
Background: Understanding gene regulatory networks has become one of the central research problems in bioinformatics. More than thirty algorithms have been proposed to identify DN...
Jianjun Hu, Yifeng D. Yang, Daisuke Kihara
BMCBI
2006
122views more  BMCBI 2006»
14 years 11 months ago
Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle
Background: A transcriptional regulatory module (TRM) is a set of genes that is regulated by a common set of transcription factors (TFs). By organizing the genome into TRMs, a liv...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
BMCBI
2006
114views more  BMCBI 2006»
14 years 11 months ago
PROMPT: a protein mapping and comparison tool
Background: Comparison of large protein datasets has become a standard task in bioinformatics. Typically researchers wish to know whether one group of proteins is significantly en...
Thorsten Schmidt, Dmitrij Frishman
BMCBI
2006
127views more  BMCBI 2006»
14 years 11 months ago
PathogenMIPer: a tool for the design of molecular inversion probes to detect multiple pathogens
Background: Here we describe PathogenMIPer, a software program for designing molecular inversion probe (MIP) oligonucleotides for use in pathogen identification and detection. The...
Sreedevi Thiyagarajan, Miloslav Karhanek, Michael ...
CCR
2006
135views more  CCR 2006»
14 years 11 months ago
You must be joking...: should the internet have an ON/OFF switch?
If despite your better judgment you decide to read this article, keep in mind that it was written during the summer, and this has been the hottest summer ever. To avoid such artic...
Michalis Faloutsos
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