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» Visual Exploration of Genomic Data
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BMCBI
2007
92views more  BMCBI 2007»
15 years 4 months ago
Nanopore current transduction analysis of protein binding to non-terminal and terminal DNA regions: analysis of transcription fa
Background: Synthetic transcription factors (STFs) promise to offer a powerful new therapeutic against Cancer, AIDS, and genetic disease. Currently, 10% of drugs are of this type,...
Stephen Winters-Hilt, Amanda Davis, Iftekhar Amin,...
AVI
2010
15 years 5 months ago
Advanced visual analytics interfaces
Advanced visual interfaces, like the ones found in informaualization, intend to offer a view on abstract data spaces to enable users to make sense of them. By mapping data to visu...
Daniel A. Keim, Peter Bak, Enrico Bertini, Daniela...
BMCBI
2006
118views more  BMCBI 2006»
15 years 4 months ago
Djinn Lite: a tool for customised gene transcript modelling, annotation-data enrichment and exploration
Background: There is an ever increasing rate of data made available on genetic variation, transcriptomes and proteomes. Similarly, a growing variety of bioinformatic programs are ...
Erdahl T. Teber, Edward Crawford, Kent B. Bolton, ...
POPL
2008
ACM
16 years 4 months ago
Boomerang: resourceful lenses for string data
A lens is a bidirectional program. When read from left to right, it denotes an ordinary function that maps inputs to outputs. When read from right to left, it denotes an "upd...
Aaron Bohannon, J. Nathan Foster, Benjamin C. Pier...
BMCBI
2010
127views more  BMCBI 2010»
15 years 4 months ago
Deriving enzymatic and taxonomic signatures of metagenomes from short read data
Background: We propose a method for deriving enzymatic signatures from short read metagenomic data of unknown species. The short read data are converted to six pseudo-peptide cand...
Uri Weingart, Erez Persi, Uri Gophna, David Horn