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BMCBI
2010
126views more  BMCBI 2010»
14 years 12 months ago
Cgaln: fast and space-efficient whole-genome alignment
Background: Whole-genome sequence alignment is an essential process for extracting valuable information about the functions, evolution, and peculiarities of genomes under investig...
Ryuichiro Nakato, Osamu Gotoh
BMCBI
2010
134views more  BMCBI 2010»
14 years 12 months ago
ScreenMill: A freely available software suite for growth measurement, analysis and visualization of high-throughput screen data
Background: Many high-throughput genomic experiments, such as Synthetic Genetic Array and yeast two-hybrid, use colony growth on solid media as a screen metric. These experiments ...
John C. Dittmar, Robert J. D. Reid, Rodney Rothste...
BMCBI
2010
193views more  BMCBI 2010»
14 years 12 months ago
MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
Background: Mass spectrometry (MS) coupled with online separation methods is commonly applied for differential and quantitative profiling of biological samples in metabolomic as w...
Tomás Pluskal, Sandra Castillo, Alejandro V...
VIS
2008
IEEE
135views Visualization» more  VIS 2008»
16 years 1 months ago
Interactive Volume Exploration for Feature Detection and Quantification in Industrial CT Data
This paper presents a novel method for interactive exploration of industrial CT volumes such as cast metal parts, with the goal of interactively detecting, classifying, and quantif...
Markus Hadwiger, Laura Fritz, Christof Rezk-Sala...
ICDM
2002
IEEE
106views Data Mining» more  ICDM 2002»
15 years 4 months ago
Neighborgram Clustering Interactive Exploration of Cluster Neighborhoods
Proceedings of IEEE Data Mining, IEEE Press, pp. 581-584, 2002. We describe an interactive way to generate a set of clusters for a given data set. The clustering is done by constr...
Michael R. Berthold, Bernd Wiswedel, David E. Patt...