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BMCBI
2006
100views more  BMCBI 2006»
14 years 12 months ago
DNPTrapper: an assembly editing tool for finishing and analysis of complex repeat regions
Background: Many genome projects are left unfinished due to complex, repeated regions. Finishing is the most time consuming step in sequencing and current finishing tools are not ...
Erik Arner, Martti T. Tammi, Anh-Nhi Tran, Ellen K...
BMCBI
2008
130views more  BMCBI 2008»
14 years 12 months ago
A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
Sheila Podell, Terry Gaasterland, Eric E. Allen
BMCBI
2010
133views more  BMCBI 2010»
14 years 12 months ago
Data analysis issues for allele-specific expression using Illumina's GoldenGate assay
Background: High-throughput measurement of allele-specific expression (ASE) is a relatively new and exciting application area for array-based technologies. In this paper, we explo...
Matthew E. Ritchie, Matthew S. Forrest, Antigone S...
VISUALIZATION
1997
IEEE
15 years 4 months ago
Visualizing the behavior of higher dimensional dynamical systems
In recent years scientific visualization has been driven by the need to visualize high-dimensional data sets within high-dimensional spaces. However most visualization methods ar...
Rainer Wegenkittl, Helwig Löffelmann, Eduard ...
VISUALIZATION
2000
IEEE
15 years 4 months ago
Fast visualization methods for comparing dynamics: a case study in combustion
Visualization can be an important tool for displaying, categorizing and digesting large quantities of inter-related information during laboratory and simulation experiments. Summa...
Kay A. Robbins, Michael Gorman