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» Visual Exploration of Genomic Data
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BMCBI
2008
226views more  BMCBI 2008»
14 years 12 months ago
ProteoLens: a visual analytic tool for multi-scale database-driven biological network data mining
Background: New systems biology studies require researchers to understand how interplay among myriads of biomolecular entities is orchestrated in order to achieve high-level cellu...
Tianxiao Huan, Andrey Y. Sivachenko, Scott H. Harr...
IPPS
2009
IEEE
15 years 6 months ago
Exploring FPGAs for accelerating the phylogenetic likelihood function
Driven by novel biological wet lab techniques such as pyrosequencing there has been an unprecedented molecular data explosion over the last 2-3 years. The growth of biological seq...
Nikolaos Alachiotis, Euripides Sotiriades, Apostol...
NAR
2011
223views Computer Vision» more  NAR 2011»
14 years 2 months ago
ODB: a database for operon organizations, 2011 update
ODB (Operon DataBase) aims to collect data of all known and conserved operons in completely sequenced genomes. Three newly updated features of this database have been added as fol...
Shujiro Okuda, Akiyasu C. Yoshizawa
TCBB
2010
136views more  TCBB 2010»
14 years 10 months ago
Integrating Data Clustering and Visualization for the Analysis of 3D Gene Expression Data
— The recent development of methods for extracting precise measurements of spatial gene expression patterns from three-dimensional (3D) image data opens the way for new analyses ...
Oliver Rübel, Gunther H. Weber, Min-Yu Huang,...
VDA
2010
185views Visualization» more  VDA 2010»
15 years 2 months ago
Visualizing multidimensional data through granularity-dependent spatialization
Spatialization is a special kind of visualization that projects multidimensional data into low-dimensional representational spaces by making use of spatial metaphors. Spatializati...
Sofia Kontaxaki, Eleni Tomai, Margarita Kokla, Mar...