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BMCBI
2005
152views more  BMCBI 2005»
14 years 9 months ago
GeneKeyDB: A lightweight, gene-centric, relational database to support data mining environments
Background: The analysis of biological data is greatly enhanced by existing or emerging databases. Most existing databases, with few exceptions are not designed to easily support ...
S. A. Kirov, X. Peng, E. Baker, D. Schmoyer, B. Zh...
ISVC
2010
Springer
14 years 8 months ago
Visual Network Analysis of Dynamic Metabolic Pathways
We extend our previous work on the exploration of static metabolic networks to evolving, and therefore dynamic, pathways. We apply our visualization software to data from a simulat...
Markus Rohrschneider, Alexander Ullrich, Andreas K...
BMCBI
2007
80views more  BMCBI 2007»
14 years 9 months ago
A network perspective on the topological importance of enzymes and their phylogenetic conservation
Background: A metabolic network is the sum of all chemical transformations or reactions in the cell, with the metabolites being interconnected by enzyme-catalyzed reactions. Many ...
Wei-chung Liu, Wen-hsien Lin, Andrew J. Davis, Fer...
BMCBI
2006
190views more  BMCBI 2006»
14 years 9 months ago
VANTED: A system for advanced data analysis and visualization in the context of biological networks
Background: Recent advances with high-throughput methods in life-science research have increased the need for automatized data analysis and visual exploration techniques. Sophisti...
Björn H. Junker, Christian Klukas, Falk Schre...
CORR
2010
Springer
136views Education» more  CORR 2010»
14 years 8 months ago
NgViz: Detecting DNS Tunnels through N-Gram Visualization and Quantitative Analysis
This paper introduced NgViz, a tool that examines DNS traffic and shows anomalies in n-gram frequencies. This is accomplished by comparing input files against a fingerprint of leg...
Kenton Born, David Gustafson