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BMCBI
2008
160views more  BMCBI 2008»
15 years 4 months ago
Feature selection environment for genomic applications
Background: Feature selection is a pattern recognition approach to choose important variables according to some criteria in order to distinguish or explain certain phenomena (i.e....
Fabrício Martins Lopes, David Correa Martin...
CSB
2005
IEEE
129views Bioinformatics» more  CSB 2005»
15 years 10 months ago
ssahaSNP A Polymorphism Detection Tool on a Whole Genome Scale
We present a software package which can detect homozygous SNPs and indels on a eukaryotic genome scale from millions of shotgun reads. Matching seeds of a few kmer words are found...
Zemin Ning, Mario Cáccamo, James C. Mulliki...
CSB
2004
IEEE
142views Bioinformatics» more  CSB 2004»
15 years 8 months ago
FastR: Fast Database Search Tool for Non-Coding RNA
The discovery of novel non-coding RNAs has been among the most exciting recent developments in Biology. Yet, many more remain undiscovered. It has been hypothesized that there is ...
Vineet Bafna, Shaojie Zhang
CSWWS
2006
15 years 8 months ago
Fulfilling the Needs of a Metadata Creator and Analyst- An Investigation of RDF Browsing and Visualization Tools
The realization of Semantic Web vision is based on the creation and use of semantic web content which needs software tools both for semantic web developers and end users. Over the ...
Shah Kushro, A. Min Tjoa
BIBE
2008
IEEE
15 years 10 months ago
VIP: Visualization of integrated proteomics data
—The post-genomic era is characterized by the rapid data accumulation leading to unwieldy and large volumes of biological data. The proteomics results (large sets of identified p...
Eugenia G. Giannopoulou, Giorgos Lepouras, Elias S...