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» Visualising phylogenetic trees
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RECOMB
2003
Springer
15 years 9 months ago
Maximum likelihood on four taxa phylogenetic trees: analytic solutions
Benny Chor, Amit Khetan, Sagi Snir
89
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JBI
2006
14 years 9 months ago
Support versus corroboration
Numerous metrics have been developed that attempt to assess the reliability of phylogenetic trees. Several of these commonly used measures of tree and tree branch support are desc...
Mary G. Egan
IPPS
2006
IEEE
15 years 3 months ago
Parallel multiple sequence alignment with local phylogeny search by simulated annealing
The problem of multiple sequence alignment is one of the most important problems in computational biology. In this paper we present a new method that simultaneously performs multi...
Jaroslaw Zola, Denis Trystram, Andrei Tchernykh, C...
JCB
2006
67views more  JCB 2006»
14 years 9 months ago
The Identifiability of Tree Topology for Phylogenetic Models, Including Covarion and Mixture Models
For a model of molecular evolution to be useful for phylogenetic inference, the topology of evolutionary trees must be identifiable. That is, from a joint distribution the model p...
Elizabeth S. Allman, John A. Rhodes
BMCBI
2006
161views more  BMCBI 2006»
14 years 9 months ago
A novel approach to phylogenetic tree construction using stochastic optimization and clustering
Background: The problem of inferring the evolutionary history and constructing the phylogenetic tree with high performance has become one of the major problems in computational bi...
Ling Qin, Yixin Chen, Yi Pan, Ling Chen