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» Visualization methods for statistical analysis of microarray...
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141
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BMCBI
2004
94views more  BMCBI 2004»
15 years 2 months ago
Caryoscope: An Open Source Java application for viewing microarray data in a genomic context
Background: Microarray-based comparative genome hybridization experiments generate data that can be mapped onto the genome. These data are interpreted more easily when represented...
Ihab A. B. Awad, Christian A. Rees, Tina Hernandez...
GPB
2010
231views Solid Modeling» more  GPB 2010»
14 years 11 months ago
Mining Gene Expression Profiles: An Integrated Implementation of Kernel Principal Component Analysis and Singular Value Decompos
The detection of genes that show similar profiles under different experimental conditions is often an initial step in inferring the biological significance of such genes. Visualiz...
Ferran Reverter, Esteban Vegas, Pedro Sánch...
110
Voted
ICIP
1997
IEEE
16 years 3 months ago
Surrounding Region Dependence Method for Detection of Clustered Microcalcifications on Mammograms
Clustered microcalcifications on X-ray mammograms are an important feature in the detection of breast cancer. For the detection of the clustered microcalcifications on digitized m...
Jong-Kook Kim, Hyun Wook Park
105
Voted
BMCBI
2008
137views more  BMCBI 2008»
15 years 2 months ago
VennMaster: Area-proportional Euler diagrams for functional GO analysis of microarrays
Background: Microarray experiments generate vast amounts of data. The functional context of differentially expressed genes can be assessed by querying the Gene Ontology (GO) datab...
Hans A. Kestler, André Müller, Johann ...
BMCBI
2007
157views more  BMCBI 2007»
15 years 2 months ago
Improving gene set analysis of microarray data by SAM-GS
Background: Gene-set analysis evaluates the expression of biological pathways, or a priori defined gene sets, rather than that of individual genes, in association with a binary ph...
Irina Dinu, John D. Potter, Thomas Mueller, Qi Liu...