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BMCBI
2007
148views more  BMCBI 2007»
15 years 2 months ago
Evaluation of gene-expression clustering via mutual information distance measure
Background: The definition of a distance measure plays a key role in the evaluation of different clustering solutions of gene expression profiles. In this empirical study we compa...
Ido Priness, Oded Maimon, Irad E. Ben-Gal
ASWEC
2000
IEEE
15 years 7 months ago
ReVis: Reverse Engineering by Clustering and Visual Object Classification
This paper presents the framework of a scale-oriented scheme for the presentation and classification of reverse engineered sections of procedural code into objects. The aim is to ...
Aaron J. Quigley, Margot Postema, Heinz W. Schmidt
BMCBI
2008
259views more  BMCBI 2008»
15 years 2 months ago
DISCLOSE : DISsection of CLusters Obtained by SEries of transcriptome data using functional annotations and putative transcripti
Background: A typical step in the analysis of gene expression data is the determination of clusters of genes that exhibit similar expression patterns. Researchers are confronted w...
Evert-Jan Blom, Sacha A. F. T. van Hijum, Klaas J....
WABI
2004
Springer
132views Bioinformatics» more  WABI 2004»
15 years 7 months ago
Joint Analysis of DNA Copy Numbers and Gene Expression Levels
Abstract. Genomic instabilities, amplifications, deletions and translocations are often observed in tumor cells. In the process of cancer pathogenesis cells acquire multiple genom...
Doron Lipson, Amir Ben-Dor, Elinor Dehan, Zohar Ya...
BMCBI
2007
111views more  BMCBI 2007»
15 years 2 months ago
MotifCombinator: a web-based tool to search for combinations of cis-regulatory motifs
Background: A combination of multiple types of transcription factors and cis-regulatory elements is often required for gene expression in eukaryotes, and the combinatorial regulat...
Mamoru Kato, Tatsuhiko Tsunoda