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» Visualizing Program Executions on Large Data Sets
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176
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ICWSM
2009
15 years 15 days ago
Gephi: An Open Source Software for Exploring and Manipulating Networks
Gephi is an open source software for graph and network analysis. It uses a 3D render engine to display large networks in real-time and to speed up the exploration. A flexible and ...
Mathieu Bastian, Sebastien Heymann, Mathieu Jacomy
137
Voted
CORR
2010
Springer
136views Education» more  CORR 2010»
15 years 1 months ago
Viewpoints: A high-performance high-dimensional exploratory data analysis tool
Scientific data sets continue to increase in both size and complexity. In the past, dedicated graphics systems at supercomputing centers were required to visualize large data sets,...
Paul R. Gazis, C. Levit, Michael J. Way
149
Voted
BMCBI
2010
143views more  BMCBI 2010»
15 years 2 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...
109
Voted
INFOVIS
2003
IEEE
15 years 8 months ago
A Visual Workspace for Hybrid Multidimensional Scaling Algorithms
In visualising multidimensional data, it is well known that different types of data require different types of algorithms to process them. Data sets might be distinguished accordi...
Greg Ross, Matthew Chalmers
142
Voted
BMCBI
2007
148views more  BMCBI 2007»
15 years 2 months ago
Computation of significance scores of unweighted Gene Set Enrichment Analyses
Background: Gene Set Enrichment Analysis (GSEA) is a computational method for the statistical evaluation of sorted lists of genes or proteins. Originally GSEA was developed for in...
Andreas Keller, Christina Backes, Hans-Peter Lenho...