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» Weighted analysis of general microarray experiments
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86
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BMCBI
2006
108views more  BMCBI 2006»
15 years 13 days ago
Probe set algorithms: is there a rational best bet?
Affymetrix microarrays have become a standard experimental platform for studies of mRNA expression profiling. Their success is due, in part, to the multiple oligonucleotide featur...
Jinwook Seo, Eric P. Hoffman
118
Voted
DOCENG
2006
ACM
15 years 6 months ago
NEWPAR: an automatic feature selection and weighting schema for category ranking
Category ranking provides a way to classify plain text documents into a pre-determined set of categories. This work proposes to have a look at typical document collections and ana...
Fernando Ruiz-Rico, José Luis Vicedo Gonz&a...
116
Voted
BMCBI
2007
180views more  BMCBI 2007»
15 years 12 days ago
Using expression arrays for copy number detection: an example from E. coli
Background: The sequencing of many genomes and tiling arrays consisting of millions of DNA segments spanning entire genomes have made high-resolution copy number analysis possible...
Dmitriy Skvortsov, Diana Abdueva, Michael E. Stitz...
112
Voted
BMCBI
2011
14 years 7 months ago
A Platform for Processing Expression of Short Time Series (PESTS)
Background: Time course microarray profiles examine the expression of genes over a time domain. They are necessary in order to determine the complete set of genes that are dynamic...
Anshu Sinha, Marianthi Markatou
102
Voted
BIOINFORMATICS
2010
170views more  BIOINFORMATICS 2010»
15 years 15 days ago
Joint estimation of DNA copy number from multiple platforms
DNA copy number variants (CNV) are gains and losses of segments of chromosomes, and comprise an important class of genetic variation. Recently, various microarray hybridization ba...
Nancy R. Zhang, Yasin Senbabaoglu, Jun Z. Li