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ALMOB
2007
155views more  ALMOB 2007»
15 years 29 days ago
Finding coevolving amino acid residues using row and column weighting of mutual information and multi-dimensional amino acid rep
Background: Some amino acid residues functionally interact with each other. This interaction will result in an evolutionary co-variation between these residues – coevolution. Ou...
Rodrigo Gouveia-Oliveira, Anders Gorm Pedersen
144
Voted
AMAI
2007
Springer
15 years 29 days ago
Relational concept discovery in structured datasets
Relational datasets, i.e., datasets in which individuals are described both by their own features and by their relations to other individuals, arise from various sources such as d...
Marianne Huchard, Mohamed Rouane Hacene, Cyril Rou...
95
Voted
BMCBI
2010
118views more  BMCBI 2010»
15 years 28 days ago
Testing for mean and correlation changes in microarray experiments: an application for pathway analysis
Background: Microarray experiments examine the change in transcript levels of tens of thousands of genes simultaneously. To derive meaningful data, biologists investigate the resp...
Mayer Alvo, Zhongzhu Liu, Andrew Williams, Carole ...
109
Voted
BMCBI
2010
106views more  BMCBI 2010»
15 years 28 days ago
A computational evaluation of over-representation of regulatory motifs in the promoter regions of differentially expressed genes
Background: Observed co-expression of a group of genes is frequently attributed to co-regulation by shared transcription factors. This assumption has led to the hypothesis that pr...
Guofeng Meng, Axel Mosig, Martin Vingron
106
Voted
BMCBI
2010
125views more  BMCBI 2010»
15 years 28 days ago
In-silico prediction of blood-secretory human proteins using a ranking algorithm
Background: Computational identification of blood-secretory proteins, especially proteins with differentially expressed genes in diseased tissues, can provide highly useful inform...
Qi Liu, Juan Cui, Qiang Yang, Ying Xu
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