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112
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BMCBI
2008
89views more  BMCBI 2008»
15 years 22 days ago
Increasing the efficiency of bacterial transcription simulations: When to exclude the genome without loss of accuracy
Background: Simulating the major molecular events inside an Escherichia coli cell can lead to a very large number of reactions that compose its overall behaviour. Not only should ...
Marco A. J. Iafolla, Guang Qiang Dong, David R. Mc...
BMCBI
2006
155views more  BMCBI 2006»
15 years 20 days ago
AffyMiner: mining differentially expressed genes and biological knowledge in GeneChip microarray data
Background: DNA microarrays are a powerful tool for monitoring the expression of tens of thousands of genes simultaneously. With the advance of microarray technology, the challeng...
Guoqing Lu, The V. Nguyen, Yuannan Xia, Michael Fr...
128
Voted
BMCBI
2004
117views more  BMCBI 2004»
15 years 14 days ago
CisOrtho: A program pipeline for genome-wide identification of transcription factor target genes using phylogenetic footprinting
Background: All known genomes code for a large number of transcription factors. It is important to develop methods that will reveal how these transcription factors act on a genome...
Henry R. Bigelow, Adam S. Wenick, Allan Wong, Oliv...
SIGMETRICS
2002
ACM
105views Hardware» more  SIGMETRICS 2002»
15 years 8 days ago
Modeling and analysis of dynamic coscheduling in parallel and distributed environments
Scheduling in large-scale parallel systems has been and continues to be an important and challenging research problem. Several key factors, including the increasing use of off-the...
Mark S. Squillante, Yanyong Zhang, Anand Sivasubra...
106
Voted
CVPR
2006
IEEE
16 years 2 months ago
Principled Hybrids of Generative and Discriminative Models
When labelled training data is plentiful, discriminative techniques are widely used since they give excellent generalization performance. However, for large-scale applications suc...
Julia A. Lasserre, Christopher M. Bishop, Thomas P...