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IJBRA
2007
80views more  IJBRA 2007»
14 years 10 months ago
On predicting secondary structure transition
A function of a protein is dependent on its structure; therefore, predicting a protein structure from an amino acid sequence is an active area of research. Optimally predicting a ...
Raja Loganantharaj, Vivek Philip
BMCBI
2005
99views more  BMCBI 2005»
14 years 10 months ago
Super paramagnetic clustering of protein sequences
Background: Detection of sequence homologues represents a challenging task that is important for the discovery of protein families and the reliable application of automatic annota...
Igor V. Tetko, Axel Facius, Andreas Ruepp, Hans-We...
TVCG
2008
87views more  TVCG 2008»
14 years 10 months ago
The Seismic Analyzer: Interpreting and Illustrating 2D Seismic Data
We present a toolbox for quickly interpreting and illustrating 2D slices of seismic volumetric reflection data. Searching for oil and gas involves creating a structural overview of...
Daniel Patel, Christopher Giertsen, John Thurmond,...
BMCBI
2004
125views more  BMCBI 2004»
14 years 10 months ago
A fast algorithm for determining the best combination of local alignments to a query sequence
Background: Existing sequence alignment algorithms assume that similarities between DNA or amino acid sequences are linearly ordered. That is, stretches of similar nucleotides or ...
Gavin C. Conant, Andreas Wagner
JCB
2002
111views more  JCB 2002»
14 years 10 months ago
A General Edit Distance between RNA Structures
Arc-annotated sequences are useful in representing the structural information of RNA sequences. In general, RNA secondary and tertiary structures can be represented as a set of ne...
Tao Jiang, Guohui Lin, Bin Ma, Kaizhong Zhang