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ISMB
1998
15 years 4 days ago
Identification of Divergent Functions in Homologous Proteins by Induction over Conserved Modules
Homologousproteins do not necessarily exhibit identical biochemicalfunction. Despitethis fact, local or global sequence similarity is widely used as an indication of functional id...
Imran Shah, Lawrence Hunter
PADL
2004
Springer
15 years 4 months ago
Observing Functional Logic Computations
Abstract. A lightweight approach to debugging functional logic programs by observations is presented, implemented for the language Curry. The Curry Object Observation System (COOSy...
Bernd Brassel, Olaf Chitil, Michael Hanus, Frank H...
BMCBI
2010
96views more  BMCBI 2010»
14 years 11 months ago
ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data
Background: Chromatin immunoprecipitation (ChIP) followed by high-throughput sequencing (ChIP-seq) or ChIP followed by genome tiling array analysis (ChIP-chip) have become standar...
Lihua J. Zhu, Claude Gazin, Nathan D. Lawson, Herv...
ESOP
2010
Springer
15 years 8 months ago
Amortized Resource Analysis with Polynomial Potential - A Static Inference of Polynomial Bounds for Functional Programs
In 2003, Hofmann and Jost introduced a type system that uses a potential-based amortized analysis to infer bounds on the resource consumption of (first-order) functional programs. ...
Jan Hoffmann and Martin Hofmann
ICDM
2006
IEEE
127views Data Mining» more  ICDM 2006»
15 years 4 months ago
Predictive Integration of Gene Ontology-Driven Similarity and Functional Interactions
There is a need to develop methods to automatically incorporate prior knowledge to support the prediction and validation of novel functional associations. One such important sourc...
Francisco Azuaje, Haiying Wang, Huiru Zheng, Olivi...