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BMCBI
2007
168views more  BMCBI 2007»
14 years 11 months ago
GOSim - an R-package for computation of information theoretic GO similarities between terms and gene products
Background: With the increased availability of high throughput data, such as DNA microarray data, researchers are capable of producing large amounts of biological data. During the...
Holger Fröhlich, Nora Speer, Annemarie Poustk...
BMCBI
2006
97views more  BMCBI 2006»
14 years 11 months ago
REEF: searching REgionally Enriched Features in genomes
Background: In Eukaryotic genomes, different features including genes are not uniformly distributed. The integration of annotation information and genomic position of functional D...
Alessandro Coppe, Gian Antonio Danieli, Stefania B...
BMCBI
2002
129views more  BMCBI 2002»
14 years 11 months ago
SeqHound: biological sequence and structure database as a platform for bioinformatics research
Background: SeqHound has been developed as an integrated biological sequence, taxonomy, annotation and 3-D structure database system. It provides a high-performance server platfor...
Katerina Michalickova, Gary D. Bader, Michel Dumon...
ISPAN
2002
IEEE
15 years 4 months ago
Building Ontology for Optimization and Composition of Parallel JavaBean Programs
Abstract— In this paper, we propose an ontology specification for JavaBean programs, the object component model of Java. Our specification is written using the DAML+OIL languag...
Cheng-Wei Chen, Chung-Kai Chen, Jenq Kuen Lee
BMCBI
2007
121views more  BMCBI 2007»
14 years 11 months ago
A procedure for identifying homologous alternative splicing events
Background: The study of the functional role of alternative splice isoforms of a gene is a very active area of research in biology. The difficulty of the experimental approach (in...
David Talavera, Adam Hospital, Modesto Orozco, Xav...