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    BMCBI
    2008
    126views more  BMCBI 2008»
    NITPICK: peak identification for mass spectrometry data
    14 years 9 months ago
    NITPICK: peak identification for mass spectrometry data
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    Background: The reliable extraction of features from mass spectra is a fundamental step in the automated analysis of proteomic mass spectrometry (MS) experiments. Results: This co...
    Bernhard Y. Renard, Marc Kirchner, Hanno Steen, Ju...
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    BMCBI
    2007
    134views more  BMCBI 2007»
    A framework for significance analysis of gene expression data using dimension reduction methods
    14 years 9 months ago
    A framework for significance analysis of gene expression data using dimension reduction methods
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    Background: The most popular methods for significance analysis on microarray data are well suited to find genes differentially expressed across predefined categories. However, ide...
    Lars Halvor Gidskehaug, Endre Anderssen, Arnar Fla...
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    BMCBI
    2008
    178views more  BMCBI 2008»
    Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate vi
    14 years 9 months ago
    Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate vi
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    Background: The DNA microarray technology allows the measurement of expression levels of thousands of genes under tens/hundreds of different conditions. In microarray data, genes ...
    Kin-On Cheng, Ngai-Fong Law, Wan-Chi Siu, Alan Wee...
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    BMCBI
    2007
    126views more  BMCBI 2007»
    High-throughput identification of interacting protein-protein binding sites
    14 years 9 months ago
    High-throughput identification of interacting protein-protein binding sites
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    Background: With the advent of increasing sequence and structural data, a number of methods have been proposed to locate putative protein binding sites from protein surfaces. Ther...
    Jo-Lan Chung, Wei Wang, Philip E. Bourne
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    BMCBI
    2007
    122views more  BMCBI 2007»
    TAP score: torsion angle propensity normalization applied to local protein structure evaluation
    14 years 9 months ago
    TAP score: torsion angle propensity normalization applied to local protein structure evaluation
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    Background: Experimentally determined protein structures may contain errors and require validation. Conformational criteria based on the Ramachandran plot are mainly used to disti...
    Silvio C. E. Tosatto, Roberto Battistutta
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