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» bdbms - A Database Management System for Biological Data
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BMCBI
2008
138views more  BMCBI 2008»
15 years 2 months ago
Novel implementation of conditional co-regulation by graph theory to derive co-expressed genes from microarray data
Background: Most existing transcriptional databases like Comprehensive Systems-Biology Database (CSB.DB) and Arabidopsis Microarray Database and Analysis Toolbox (GENEVESTIGATOR) ...
Arun Rawat, Georg J. Seifert, Youping Deng
143
Voted
BMCBI
2008
115views more  BMCBI 2008»
15 years 2 months ago
Systems biology driven software design for the research enterprise
Background: In systems biology, and many other areas of research, there is a need for the interoperability of tools and data sources that were not originally designed to be integr...
John Boyle, Christopher C. Cavnor, Sarah A. Killco...
128
Voted
DILS
2006
Springer
15 years 5 months ago
Collection-Oriented Scientific Workflows for Integrating and Analyzing Biological Data
Steps in scientific workflows often generate collections of results, causing the data flowing through workflows to become increasingly nested. Because conventional workflow compone...
Timothy M. McPhillips, Shawn Bowers, Bertram Lud&a...
PODS
2005
ACM
123views Database» more  PODS 2005»
16 years 2 months ago
Schema mappings, data exchange, and metadata management
Schema mappings are high-level specifications that describe the relationship between database schemas. Schema mappings are prominent in several different areas of database managem...
Phokion G. Kolaitis
ICDE
2007
IEEE
104views Database» more  ICDE 2007»
16 years 3 months ago
Indexing Uncertain Categorical Data
Uncertainty in categorical data is commonplace in many applications, including data cleaning, database integration, and biological annotation. In such domains, the correct value o...
Sarvjeet Singh, Chris Mayfield, Sunil Prabhakar, R...