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SIGMOD
2004
ACM
121views Database» more  SIGMOD 2004»
16 years 20 days ago
An Optimal Algorithm for Querying Tree Structures and its Applications in Bioinformatics
Trees and graphs are widely used to model biological databases. Providing efficient algorithms to support tree-based or graph-based querying is therefore an important issue. In th...
Hsiao-Fei Liu, Ya-Hui Chang, Kun-Mao Chao
120
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DILS
2004
Springer
15 years 5 months ago
PROVA: Rule-Based Java-Scripting for a Bioinformatics Semantic Web
Abstract. Transparent information integration across distributed and heterogeneous data sources and computational tools is a prime concern for bioinformatics. Recently, there have ...
Alexander Kozlenkov, Michael Schroeder
WOB
2004
103views Bioinformatics» more  WOB 2004»
15 years 1 months ago
An I/O Device Driver for Bioinformatics Tools: the case for BLAST
There are many bioinformatics tools that deal with input/ output (I/O) issues by using filing systems from the most common operating systems, such as Linux or MS Windows. However, ...
Renato Mauro, Sérgio Lifschitz
GECCO
2004
Springer
169views Optimization» more  GECCO 2004»
15 years 5 months ago
Genetic Programming Neural Networks as a Bioinformatics Tool for Human Genetics
The identification of genes that influence the risk of common, complex diseases primarily through interactions with other genes and environmental factors remains a statistical and ...
Marylyn D. Ritchie, Christopher S. Coffey, Jason H...
94
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SWAT
2004
Springer
98views Algorithms» more  SWAT 2004»
15 years 5 months ago
Tight Approximability Results for Test Set Problems in Bioinformatics
In this paper, we investigate the test set problem and its variations that appear in a variety of applications. In general, we are given a universe of objects to be “distinguish...
Piotr Berman, Bhaskar DasGupta, Ming-Yang Kao