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DNA
2004
Springer
102views Bioinformatics» more  DNA 2004»
15 years 4 months ago
Minimum Basin Algorithm: An Effective Analysis Technique for DNA Energy Landscapes
To design DNA nano-machines or analyze DNA molecular reactions, it is important to be able to predict the energy landscape of molecular structures and the energy barrier of a trans...
Mitsuhiro Kubota, Masami Hagiya
99
Voted
BIBE
2004
IEEE
120views Bioinformatics» more  BIBE 2004»
15 years 4 months ago
Identifying Projected Clusters from Gene Expression Profiles
In microarray gene expression data, clusters may hide in subspaces. Traditional clustering algorithms that make use of similarity measurements in the full input space may fail to ...
Kevin Y. Yip, David W. Cheung, Michael K. Ng, Kei-...
84
Voted
ICCSA
2004
Springer
15 years 5 months ago
A Sequence-Focused Parallelisation of EMBOSS on a Cluster of Workstations
Abstract. A number of individual bioinformatics applications (particularly BLAST and other sequence searching methods) have recently been implemented over clusters of workstations ...
Karl Podesta, Martin Crane, Heather J. Ruskin
HT
2004
ACM
15 years 6 months ago
Practical applitudes: case studies of applications of the ZigZag hypermedia system
ZigZag is a paradigm of hypermedia that consists of a multidimensional system of principled interconnections. Its basic features and specifications are now well known, but despite...
Adam Moore, James Goulding, Tim J. Brailsford, Hel...
CSB
2004
IEEE
115views Bioinformatics» more  CSB 2004»
15 years 4 months ago
PoPS: A Computational Tool for Modeling and Predicting Protease Specificity
Proteases play a fundamental role in the control of intra- and extracellular processes by binding and cleaving specific amino acid sequences. Identifying these targets is extremel...
Sarah E. Boyd, Maria J. García de la Banda,...