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115
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BIBE
2004
IEEE
149views Bioinformatics» more  BIBE 2004»
15 years 4 months ago
Interactive 3D Protein Structure Visualization Using Virtual Reality
Large-scale biomedical data sets of macromolecular structures such as DNA and proteins describe highly complex biomolecular entities which often consist of thousands of atoms and ...
Elke Moritz, Jörg Meyer
CSB
2004
IEEE
141views Bioinformatics» more  CSB 2004»
15 years 4 months ago
MinPD: Distance-Based Phylogenetic Analysis and Recombination Detection of Serially-Sampled HIV Quasispecies
A new computational method to study within-host viral evolution is explored to better understand the evolution and pathogenesis of viruses. Traditional phylogenetic tree methods a...
Patricia Buendia, Giri Narasimhan
82
Voted
CSB
2004
IEEE
110views Bioinformatics» more  CSB 2004»
15 years 4 months ago
SPIDER: Software for Protein Identification from Sequence Tags with De Novo Sequencing Error
For the identification of novel proteins using MS/MS, de novo sequencing software computes one or several possible amino acid sequences (called sequence tags) for each MS/MS spect...
Yonghua Han, Bin Ma, Kaizhong Zhang
93
Voted
CSB
2004
IEEE
108views Bioinformatics» more  CSB 2004»
15 years 4 months ago
Embedded Computation of Maximum-Likelihood Phylogeny Inference Using Platform FPGA
Our previous work to accelerate phylogeny inference using HW/SW(Hardware/Software) co-design has recently been extended to a more powerful embedded computing platform. In this pla...
Terrence S. T. Mak, Kai-Pui Lam
CSB
2004
IEEE
158views Bioinformatics» more  CSB 2004»
15 years 4 months ago
Algorithms for Association Study Design Using a Generalized Model of Haplotype Conservation
There is considerable interest in computational methods to assist in the use of genetic polymorphism data for locating disease-related genes. Haplotypes, contiguous sets of correl...
Russell Schwartz