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CSB
2004
IEEE
15 years 4 months ago
MISAE: A New Approach for Regulatory Motif Extraction
The recognition of regulatory motifs of co-regulated genes is essential for understanding the regulatory mechanisms. However, the automatic extraction of regulatory motifs from a ...
Zhaohui Sun, Jingyi Yang, Jitender S. Deogun
87
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CSB
2004
IEEE
106views Bioinformatics» more  CSB 2004»
15 years 4 months ago
A Theoretical Analysis of Gene Selection
A great deal of recent research has focused on the challenging task of selecting differentially expressed genes from microarray data (`gene selection'). Numerous gene selecti...
Sach Mukherjee, Stephen J. Roberts
94
Voted
CSB
2004
IEEE
136views Bioinformatics» more  CSB 2004»
15 years 4 months ago
Minimum Entropy Clustering and Applications to Gene Expression Analysis
Clustering is a common methodology for analyzing the gene expression data. In this paper, we present a new clustering algorithm from an information-theoretic point of view. First,...
Haifeng Li, Keshu Zhang, Tao Jiang
116
Voted
BIBE
2004
IEEE
107views Bioinformatics» more  BIBE 2004»
15 years 4 months ago
Fast Parallel Molecular Algorithms for DNA-based Computation: Factoring Integers
The RSA public-key cryptosystem is an algorithm that converts input data to an unrecognizable encryption and converts the unrecognizable data back into its original decryption form...
Weng-Long Chang, Michael (Shan-Hui) Ho, Minyi Guo
80
Voted
CSB
2004
IEEE
123views Bioinformatics» more  CSB 2004»
15 years 4 months ago
A New Hardware Architecture for Genomic and Proteomic Sequence Alignment
We describe a novel hardware architecture for genomic and proteomic sequence alignment which achieves a speed-up of two to three orders of magnitude over Smith-Waterman dynamic pr...
Greg Knowles, Paul Gardner-Stephen