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CSB
2005
IEEE
130views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Integration of RNA Search methods for Identifying Novel Riboswitch Patterns in Eukaryotes
Riboswitches are RNA genetic control elements that were recently discovered in living cells. To regulate gene expression, they utilize a unique mechanism whereby small molecules b...
Adaya N. Cohen, Klara Kedem, Michal Shapira, Danny...
CSB
2005
IEEE
139views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Open Microscopy Environment
High-throughput scoring of image-based biological assays heavily depends on the extraction of quantitative numerical information from microscopy images. This paper describes how t...
Ilya G. Goldberg
CSB
2005
IEEE
167views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Considerations in Making Microarray Cross-Platform Correlations
Comparison and integration of expression data derived from diverse microarray platforms is challenging. Factors affecting cross-platform comparison of microarray data include the ...
Manohar Kollegal, Sudeshna Adak, Richard Shippy, T...
CSB
2005
IEEE
125views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Islands of Tractability for Parsimony Haplotyping
We study the parsimony approach to haplotype inference, which calls for finding a set of haplotypes of minimum cardinality that explains an input set of genotypes. We prove that ...
Roded Sharan, Bjarni V. Halldórsson, Sorin ...
CSB
2005
IEEE
124views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Identifying Local Gene Expression Patterns in Biomolecular Networks
This study is aimed at elucidating putative transcription regulators (TRs) responsible for the observed differential expression pattern. Combined direct promoter binding and indir...
Andrey Y. Sivachenko, Anton Yuryev, Nikolai Darase...