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CSB
2005
IEEE
139views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Using Parallel Algorithms for Searching Molecular Sequence Databases
This work presents the development of algorithms for approximate string matching using parallel methods. It intends to do the maximum of molecular sequences comparisons per unity ...
Carla Correa Tavares dos Reis, Rubem P. Mondaini
BIBE
2005
IEEE
15 years 3 months ago
Using Data Mining Techniques to Learn Layouts of Flat-File Biological Datasets
One of the major problems in biological data integration is that many data sources are stored as flat-files, with a variety of different layouts. Integrating data from such sour...
Kaushik Sinha, Xuan Zhang, Ruoming Jin, Gagan Agra...
DNA
2005
Springer
144views Bioinformatics» more  DNA 2005»
15 years 3 months ago
Designing Nucleotide Sequences for Computation: A Survey of Constraints
We survey the biochemical constraints useful for the design of DNA code words for DNA computation. We define the DNA/RNA Code Constraint problem and cover biochemistry topics rel...
Jennifer A. Sager, Darko Stefanovic
BMCBI
2005
72views more  BMCBI 2005»
14 years 10 months ago
Shortest triplet clustering: reconstructing large phylogenies using representative sets
Background: Understanding the evolutionary relationships among species based on their genetic information is one of the primary objectives in phylogenetic analysis. Reconstructing...
Le Sy Vinh, Arndt von Haeseler
CSB
2005
IEEE
161views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Data Integration in the Mouse Genome Informatics (MGI) Database
The Mouse Genome Informatics (MGI) Database at The Jackson Laboratory provides a comprehensive public resource about the laboratory mouse. MGI curated data types include gene repr...
Donnie Qi, Judith A. Blake, James A. Kadin, Joel E...