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ICPPW
2005
IEEE
15 years 3 months ago
Gene Sequence Alignment on a Public Computing Platform
Public computing can potentially supply not only computational power but also memory and short term storage resources to grid and cluster scale problems. Gene sequence alignment i...
Stephen Pellicer, Nova Ahmed, Yi Pan, Yao Zheng
SAC
2005
ACM
15 years 3 months ago
Finding saddle points using stability boundaries
The task of finding saddle points on potential energy surfaces plays a crucial role in understanding the dynamics of a micro-molecule as well as in studying the folding pathways ...
Chandan K. Reddy, Hsiao-Dong Chiang
DNA
2005
Springer
118views Bioinformatics» more  DNA 2005»
15 years 3 months ago
Molecular Learning of wDNF Formulae
We introduce a class of generalized DNF formulae called wDNF or weighted disjunctive normal form, and present a molecular algorithm that learns a wDNF formula from training example...
Byoung-Tak Zhang, Ha-Young Jang
DNA
2005
Springer
128views Bioinformatics» more  DNA 2005»
15 years 3 months ago
Recognizing DNA Splicing
Abstract. Motivated by recent techniques developed for observing evolutionary dynamics of a single DNA molecule, we introduce a formal model for accepting an observed behavior of a...
Matteo Cavaliere, Natasa Jonoska, Peter Leupold
DNA
2005
Springer
132views Bioinformatics» more  DNA 2005»
15 years 3 months ago
DNA Recombination by XPCR
The first step of the Adleman-Lipton extract model in DNA computing is the combinatorial generation of libraries. In this paper a new method is proposed for generating a initial p...
Giuditta Franco, Vincenzo Manca, Cinzia Giagulli, ...