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BMCBI
2005
113views more  BMCBI 2005»
14 years 9 months ago
Microarray scanner calibration curves: characteristics and implications
Background: Microarray-based measurement of mRNA abundance assumes a linear relationship between the fluorescence intensity and the dye concentration. In reality, however, the cal...
Leming M. Shi, Weida Tong, Zhenqiang Su, Tao Han, ...
LSGRID
2004
Springer
15 years 3 months ago
Grid Portal Interface for Interactive Use and Monitoring of High-Throughput Proteome Annotation
High-throughput proteome annotation refers to the activity of extracting information from all proteins in a particular organism using bioinformatics software on a high performance ...
Atif Shahab, Danny Chuon, Toyotaro Suzumura, Wilfr...
BMCBI
2010
50views more  BMCBI 2010»
14 years 10 months ago
Scanner calibration revisited
Background: Calibration of a microarray scanner is critical for accurate interpretation of microarray results. Shi et al. (BMC Bioinformatics, 2005, 6, Art. No. S11 Suppl. 2.) rep...
Alexander E. Pozhitkov
SIGMOD
2005
ACM
99views Database» more  SIGMOD 2005»
15 years 10 months ago
WOODSS and the Web: annotating and reusing scientific workflows
This paper discusses ongoing research on scientific workflows at the Institute of Computing, University of Campinas (IC - UNICAMP) Brazil. Our projects with bio-scientists have le...
Claudia Bauzer Medeiros, José de Jesús Pérez Al...
BMCBI
2006
174views more  BMCBI 2006»
14 years 10 months ago
CARAT: A novel method for allelic detection of DNA copy number changes using high density oligonucleotide arrays
Background: DNA copy number alterations are one of the main characteristics of the cancer cell karyotype and can contribute to the complex phenotype of these cells. These alterati...
Jing Huang, Wen Wei, Joyce Chen, Jane Zhang, Guoyi...