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BIOINFORMATICS
2006
124views more  BIOINFORMATICS 2006»
14 years 10 months ago
Helix Interaction Tool (HIT): a web-based tool for analysis of helix-helix interactions in proteins
Motivation: In many proteins, helix-helix interactions can be critical to establishing protein conformation (folding) and dynamics, as well as determining associations between pro...
Anne E. Counterman Burba, Ursula Lehnert, Eric Z. ...
NAR
2006
89views more  NAR 2006»
14 years 10 months ago
AlgPred: prediction of allergenic proteins and mapping of IgE epitopes
In this study a systematic attempt has been made to integrate various approaches in order to predict allergenic proteins with high accuracy. The dataset used for testing and train...
Sudipto Saha, G. P. S. Raghava
BMCBI
2006
166views more  BMCBI 2006»
14 years 10 months ago
bioNMF: a versatile tool for non-negative matrix factorization in biology
Background: In the Bioinformatics field, a great deal of interest has been given to Non-negative matrix factorization technique (NMF), due to its capability of providing new insig...
Alberto D. Pascual-Montano, Pedro Carmona-Saez, Mo...
IJCIS
2002
255views more  IJCIS 2002»
14 years 9 months ago
BioMAS: A Multi-Agent System for Genomic Annotation
The explosive growth in genomic (and soon, expression and proteomic) data, exemplified by the Human Genome Project, is a fertile domain for the application of multi-agent informat...
Keith Decker, Salim Khan, Carl Schmidt, Gang Situ,...
DNA
2006
Springer
15 years 1 months ago
Hairpin Structures Defined by DNA Trajectories
We examine scattered hairpins, which are structures formed when a single strand of nucleotides folds into a partially hybridized stem and a loop. To specify different classes of h...
Michael Domaratzki