Background: Benchmarking algorithms in structural bioinformatics often involves the construction of datasets of proteins with given sequence and structural properties. The SCOP da...
James A. Casbon, Gavin E. Crooks, Mansoor A. S. Sa...
Time course gene expression experiments are a popular means to infer co-expression. Many methods have been proposed to cluster genes or to build networks based on similarity measu...
Nicola Neretti, Daniel Remondini, Marc Tatar, John...
Systemslevelinvestigationofgenomicscaleinformation requires the development of truly integrated databases dealing with heterogeneous data, which can be queried for simple properti...
Michael Baitaluk, Mayya Sedova, Animesh Ray, Amarn...
In many clustering applications for bioinformatics, only part of the data clusters into one or more groups while the rest needs to be pruned. For such situations, we present Hiera...
Abstract. Suffix trees are the key data structure for text string matching, and are used in wide application areas such as bioinformatics and data compression. Sparse suffix trees ...