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BMCBI
2008
78views more  BMCBI 2008»
14 years 12 months ago
Genome Environment Browser (GEB): a dynamic browser for visualising high-throughput experimental data in the context of genome f
Background: There is accumulating evidence that the milieu of repeat elements and other nongenic sequence features at a given chromosomal locus, here defined as the genome environ...
Derek Huntley, Y. Amy Tang, Tatyana B. Nesterova, ...
ALGORITHMICA
2008
52views more  ALGORITHMICA 2008»
14 years 12 months ago
From Constrained to Unconstrained Maximum Agreement Subtree in Linear Time
We propose and study the Maximum Constrained Agreement Subtree (MCAST) problem, which is a variant of the classical Maximum Agreement Subtree (MAST) problem. Our problem allows us...
V. Berry, Z. S. Peng, H. F. Ting
ICTAI
2008
IEEE
15 years 6 months ago
Haplotype Inference with Boolean Constraint Solving: An Overview
Boolean satisfiability (SAT) finds a wide range of practical applications, including Artificial Intelligence and, more recently, Bioinformatics. Although encoding some combinat...
Inês Lynce, Ana Graça, João Ma...
ARC
2008
Springer
126views Hardware» more  ARC 2008»
15 years 1 months ago
DNA Physical Mapping on a Reconfigurable Platform
Reconfigurable architectures enable the hardware function to be implemented by the user and, due to its characteristics, have been used in many areas, including Bioinformatics. One...
Adriano Idalgo, Nahri Moreano
BMCBI
2008
116views more  BMCBI 2008»
14 years 12 months ago
Impact of residue accessible surface area on the prediction of protein secondary structures
Background: The problem of accurate prediction of protein secondary structure continues to be one of the challenging problems in Bioinformatics. It has been previously suggested t...
Amir Momen-Roknabadi, Mehdi Sadeghi, Hamid Pezeshk...