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ICPADS
2008
IEEE
15 years 6 months ago
Parallel Large Scale Inference of Protein Domain Families
The resolution of combinatorial assortments of protein sequences into domains is a prerequisite for protein sequence interpretation. However the recognition and clustering of homo...
Daniel Kahn, Clément Rezvoy, Fréd&ea...
IJCNN
2008
IEEE
15 years 6 months ago
A neural network approach to ordinal regression
— Ordinal regression is an important type of learning, which has properties of both classification and regression. Here we describe an effective approach to adapt a traditional ...
Jianlin Cheng, Zheng Wang, Gianluca Pollastri
ANNPR
2008
Springer
15 years 1 months ago
Patch Relational Neural Gas - Clustering of Huge Dissimilarity Datasets
Clustering constitutes an ubiquitous problem when dealing with huge data sets for data compression, visualization, or preprocessing. Prototype-based neural methods such as neural g...
Alexander Hasenfuss, Barbara Hammer, Fabrice Rossi
CIBB
2008
15 years 1 months ago
Unsupervised Stability-Based Ensembles to Discover Reliable Structures in Complex Bio-molecular Data
The assessment of the reliability of clusters discovered in bio-molecular data is a central issue in several bioinformatics problems. Several methods based on the concept of stabil...
Alberto Bertoni, Giorgio Valentini
FPL
2008
Springer
150views Hardware» more  FPL 2008»
15 years 1 months ago
Compiler generated systolic arrays for wavefront algorithm acceleration on FPGAs
Wavefront algorithms, such as the Smith-Waterman algorithm, are commonly used in bioinformatics for exact local and global sequence alignment. These algorithms are highly computat...
Betul Buyukkurt, Walid A. Najjar