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BMCBI
2006
87views more  BMCBI 2006»
14 years 10 months ago
XML schemas for common bioinformatic data types and their application in workflow systems
Background: Today, there is a growing need in bioinformatics to combine available software tools into chains, thus building complex applications from existing single-task tools. T...
Philipp N. Seibel, Jan Krüger, Sven Hartmeier...
BMCBI
2006
67views more  BMCBI 2006»
14 years 10 months ago
A simple method to combine multiple molecular biomarkers for dichotomous diagnostic classification
Background: In spite of the recognized diagnostic potential of biomarkers, the quest for squelching noise and wringing in information from a given set of biomarkers continues. Her...
Manju R. Mamtani, Tushar P. Thakre, Mrunal Y. Kalk...
BMCBI
2006
71views more  BMCBI 2006»
14 years 10 months ago
MeMo: a hybrid SQL/XML approach to metabolomic data management for functional genomics
Background: The genome sequencing projects have shown our limited knowledge regarding gene function, e.g. S. cerevisiae has 5
Irena Spasic, Warwick B. Dunn, Giles Velarde, Andy...
BMCBI
2006
95views more  BMCBI 2006»
14 years 10 months ago
Predicting DNA-binding sites of proteins from amino acid sequence
Background: Understanding the molecular details of protein-DNA interactions is critical for deciphering the mechanisms of gene regulation. We present a machine learning approach f...
Changhui Yan, Michael Terribilini, Feihong Wu, Rob...
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BMCBI
2006
95views more  BMCBI 2006»
14 years 10 months ago
A simple method for assessing sample sizes in microarray experiments
In this short article, we discuss a simple method for assessing sample size requirements in microarray experiments. Our method starts with the output from a permutation-based anal...
Robert Tibshirani