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BMCBI
2010
92views more  BMCBI 2010»
15 years 4 months ago
Integrating gene expression and GO classification for PCA by preclustering
Background: Gene expression data can be analyzed by summarizing groups of individual gene expression profiles based on GO annotation information. The mean expression profile per g...
Jorn R. de Haan, Ester Piek, René C. van Sc...
BMCBI
2010
113views more  BMCBI 2010»
15 years 4 months ago
A classification model for distinguishing copy number variants from cancer-related alterations
Background: Both somatic copy number alterations (CNAs) and germline copy number variants (CNVs) that are prevalent in healthy individuals can appear as recurrent changes in compa...
Irina Ostrovnaya, Gouri Nanjangud, Adam B. Olshen
BMCBI
2010
156views more  BMCBI 2010»
15 years 4 months ago
Comparative classification of species and the study of pathway evolution based on the alignment of metabolic pathways
Background: Pathways provide topical descriptions of cellular circuitry. Comparing analogous pathways reveals intricate insights into individual functional differences among speci...
Adi Mano, Tamir Tuller, Oded Béjà, R...
BMCBI
2010
190views more  BMCBI 2010»
15 years 4 months ago
Sample size and statistical power considerations in high-dimensionality data settings: a comparative study of classification alg
Background: Data generated using `omics' technologies are characterized by high dimensionality, where the number of features measured per subject vastly exceeds the number of...
Yu Guo, Armin Graber, Robert N. McBurney, Raji Bal...
SOCIALCOM
2010
14 years 10 months ago
Classification of Short Text Comments by Sentiment and Actionability for VoiceYourView
Much has been documented in the literature on sentiment analysis and document summarisation. Much of this applies to long structured text in the form of documents and blog posts. W...
William Simm, Maria Angela Ferrario, Scott Songlin...