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BMCBI
2005
97views more  BMCBI 2005»
15 years 4 months ago
Phylogenetic reconstruction of ancestral character states for gene expression and mRNA splicing data
Background: As genomes evolve after speciation, gene content, coding sequence, gene expression, and splicing all diverge with time from ancestors with close relatives. A minimum e...
Roald Rossnes, Ingvar Eidhammer, David A. Liberles
BMCBI
2005
114views more  BMCBI 2005»
15 years 4 months ago
Systematic analysis of human kinase genes: a large number of genes and alternative splicing events result in functional and stru
Background: Protein kinases are a well defined family of proteins, characterized by the presence of a common kinase catalytic domain and playing a significant role in many importa...
Luciano Milanesi, Mauro Petrillo, Leandra Sepe, An...
JMM2
2007
96views more  JMM2 2007»
15 years 4 months ago
Software Watermarking Resilient to Debugging Attacks
Abstract— In 2006, Gaurav Gupta and Josef Pieprzyk presented an attack on the branch-based software watermarking scheme proposed by Ginger Myles and Hongxia Jin in 2005. The softw...
Gaurav Gupta, Josef Pieprzyk
JSS
2007
115views more  JSS 2007»
15 years 4 months ago
A case study in re-engineering to enforce architectural control flow and data sharing
Without rigorous software development and maintenance, software tends to lose its original architectural structure and become difficult to understand and modify. ArchJava, a recen...
Marwan Abi-Antoun, Jonathan Aldrich, Wesley Coelho
BMCBI
2004
200views more  BMCBI 2004»
15 years 4 months ago
ABC: software for interactive browsing of genomic multiple sequence alignment data
Background: Alignment and comparison of related genome sequences is a powerful method to identify regions likely to contain functional elements. Such analyses are data intensive, ...
Gregory M. Cooper, Senthil A. G. Singaravelu, Aren...