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ICPPW
2009
IEEE
14 years 7 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
ICSM
2009
IEEE
14 years 7 months ago
Decomposing object-oriented class modules using an agglomerative clustering technique
Software can be considered a live entity, as it undergoes many alterations throughout its lifecycle. Furthermore, developers do not usually retain a good design in favor of adding...
Marios Fokaefs, Nikolaos Tsantalis, Alexander Chat...
ICTAI
2009
IEEE
14 years 7 months ago
A Generalized Cyclic-Clustering Approach for Solving Structured CSPs
We propose a new method for solving structured CSPs which generalizes and improves the Cyclic-Clustering approach [4]. First, the cutset and the tree-decomposition of the constrai...
Cédric Pinto, Cyril Terrioux
IDA
2009
Springer
14 years 7 months ago
Estimating Hidden Influences in Metabolic and Gene Regulatory Networks
We address the applicability of blind source separation (BSS) methods for the estimation of hidden influences in biological dynamic systems such as metabolic or gene regulatory net...
Florian Blöchl, Fabian J. Theis
IEEEPACT
2009
IEEE
14 years 7 months ago
FASTM: A Log-based Hardware Transactional Memory with Fast Abort Recovery
Abstract--Version management, one of the key design dimensions of Hardware Transactional Memory (HTM) systems, defines where and how transactional modifications are stored. Current...
Marc Lupon, Grigorios Magklis, Antonio Gonzá...