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CCE
2011
14 years 10 months ago
Computational energy-based redesign of robust proteins
The robustness of a system is a property that pervades all aspects of Nature. The ability of a system to adapt itself to perturbations due to internal and external agents, to agin...
Giovanni Stracquadanio, Giuseppe Nicosia
AOSD
2011
ACM
14 years 7 months ago
An aspect-oriented approach for implementing evolutionary computation applications
Object-oriented frameworks support design and code reuse for specific application domains. To facilitate the development of evolutionary computation (EC) programs, such as geneti...
Andres J. Ramirez, Adam C. Jensen, Betty H. C. Che...
BMCBI
2011
14 years 10 months ago
PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment
Background: The Monte Carlo simulation of sequence evolution is routinely used to assess the performance of phylogenetic inference methods and sequence alignment algorithms. Progr...
Botond Sipos, Tim Massingham, Gregory E. Jordan, N...
ASPLOS
2011
ACM
14 years 7 months ago
RCDC: a relaxed consistency deterministic computer
Providing deterministic execution significantly simplifies the debugging, testing, replication, and deployment of multithreaded programs. Recent work has developed deterministic...
Joseph Devietti, Jacob Nelson, Tom Bergan, Luis Ce...
ATAL
2011
Springer
14 years 3 months ago
Decomposing constraint systems: equivalences and computational properties
Distributed systems can often be modeled as a collection of distributed (system) variables whose values are constrained by a set of constraints. In distributed multi-agent systems...
Wiebe van der Hoek, Cees Witteveen, Michael Wooldr...