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CSB
2005
IEEE
15 years 3 months ago
2005
IEEE
Human crooked neck protein (hcrn) containing 17 HAT or TPR repeats plays a role in pre-mRNA processing. Conserved residues in the TPR consensus sequence of 34 aa were found at hel...
SIGMOD
2005
ACM
15 years 9 months ago
2005
ACM
We study a problem of mining frequently occurring periodic patterns with a gap requirement from sequences. Given a character sequence S of length L and a pattern P of length l, we...
KDD
2005
ACM
15 years 9 months ago
2005
ACM
One fundamental task in near-neighbor search as well as other similarity matching efforts is to find a distance function that can efficiently quantify the similarity between two o...
RECOMB
2005
Springer
15 years 9 months ago
2005
Springer
A considerable fraction of yeast gene promoters are bound by multiple transcription factors. To study the combinatorial interactions of multiple transcription factors is thus impor...
BIBE
2005
IEEE
15 years 3 months ago
2005
IEEE
In this paper, we propose a Distance-based Sequence Indexing Method (DSIM) for indexing and searching genome databases. Borrowing the idea of video compression, we compress the ge...