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NIPS
2001
15 years 1 months ago
Thin Junction Trees
We present an algorithm that induces a class of models with thin junction trees--models that are characterized by an upper bound on the size of the maximal cliques of their triang...
Francis R. Bach, Michael I. Jordan
FUZZIEEE
2007
IEEE
15 years 6 months ago
Mining and Predicting CpG islands
— A DNA sequence can be described as a string composed of four symbols: A, T, C and G. Each symbol represents a chemically distinct nucleotide molecule. Combinations of two nucle...
Christopher Previti, Oscar Harari, Coral del Val
BMCBI
2006
64views more  BMCBI 2006»
14 years 12 months ago
In silico modelling of hormone response elements
Background: An important step in understanding the conditions that specify gene expression is the recognition of gene regulatory elements. Due to high diversity of different types...
Maria Stepanova, Feng Lin, Valerie C.-L. Lin
ALIFE
2002
14 years 11 months ago
Evolvable Self-Replicating Molecules in an Artificial Chemistry
This paper gives details of Squirm3, a new artificial environment based on a simple physics and chemistry that supports self-replicating molecules somewhat similar to DNA. The sel...
Tim J. Hutton
BMCBI
2008
149views more  BMCBI 2008»
14 years 10 months ago
MD-SeeGH: a platform for integrative analysis of multi-dimensional genomic data
Background: Recent advances in global genomic profiling methodologies have enabled multidimensional characterization of biological systems. Complete analysis of these genomic prof...
Bryan Chi, Ronald J. deLeeuw, Bradley P. Coe, Raym...