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    BMCBI
    2007
    265views more  BMCBI 2007»
    Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
    14 years 9 months ago
    Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
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    Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
    Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...
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    BMCBI
    2007
    104views more  BMCBI 2007»
    A response to Yu et al. "A forward-backward fragment assembling algorithm for the identification of genomic amplification and de
    14 years 9 months ago
    A response to Yu et al. "A forward-backward fragment assembling algorithm for the identification of genomic amplification and de
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    Background: Yu et al. (BMC Bioinformatics 2007,8: 145+) have recently compared the performance of several methods for the detection of genomic amplification and deletion breakpoin...
    Oscar M. Rueda, Ramón Díaz-Uriarte
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    BMCBI
    2007
    136views more  BMCBI 2007»
    Prediction of tissue-specific cis-regulatory modules using Bayesian networks and regression trees
    14 years 9 months ago
    Prediction of tissue-specific cis-regulatory modules using Bayesian networks and regression trees
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    Background: In vertebrates, a large part of gene transcriptional regulation is operated by cisregulatory modules. These modules are believed to be regulating much of the tissue-sp...
    Xiaoyu Chen, Mathieu Blanchette
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    BMCBI
    2007
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    CATMA, a comprehensive genome-scale resource for silencing and transcript profiling of Arabidopsis genes
    14 years 9 months ago
    CATMA, a comprehensive genome-scale resource for silencing and transcript profiling of Arabidopsis genes
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    Background: The Complete Arabidopsis Transcript MicroArray (CATMA) initiative combines the efforts of laboratories in eight European countries [1] to deliver gene-specific sequenc...
    Gert Sclep, Joke Allemeersch, Robin Liechti, Bj&ou...
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    BMCBI
    2008
    125views more  BMCBI 2008»
    SNPLims: a data management system for genome wide association studies
    14 years 9 months ago
    SNPLims: a data management system for genome wide association studies
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    Background: Recent progresses in genotyping technologies allow the generation high-density genetic maps using hundreds of thousands of genetic markers for each DNA sample. The ava...
    Alessandro Orro, Guia Guffanti, Erika Salvi, Fabio...
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