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BMCBI
2007
130views more  BMCBI 2007»
14 years 9 months ago
Differential analysis for high density tiling microarray data
Background: High density oligonucleotide tiling arrays are an effective and powerful platform for conducting unbiased genome-wide studies. The ab initio probe selection method emp...
Srinka Ghosh, Heather A. Hirsch, Edward A. Sekinge...
BMCBI
2005
127views more  BMCBI 2005»
14 years 9 months ago
Genomes are covered with ubiquitous 11 bp periodic patterns, the "class A flexible patterns"
Background: The genomes of prokaryotes and lower eukaryotes display a very strong 11 bp periodic bias in the distribution of their nucleotides. This bias is present throughout a g...
Etienne Larsabal, Antoine Danchin
CIE
2007
Springer
15 years 3 months ago
Strict Self-assembly of Discrete Sierpinski Triangles
Winfree (1998) showed that discrete Sierpinski triangles can self-assemble in the Tile Assembly Model. A striking molecular realization of this self-assembly, using DNA tiles a fe...
James I. Lathrop, Jack H. Lutz, Scott M. Summers
DLT
2007
14 years 11 months ago
Two Element Unavoidable Sets of Partial Words
d Abstract) F. Blanchet-Sadri1 , N.C. Brownstein2 , and Justin Palumbo3 1 Department of Computer Science, University of North Carolina, P.O. Box 26170, Greensboro, NC 27402–6170,...
Francine Blanchet-Sadri, N. C. Brownstein, Justin ...
DLT
2007
14 years 11 months ago
Duplication Roots
Recently the duplication closure of words and languages has received much interest. We investigate a reversal of it: the duplication root reduces a word to a square-free one. After...
Peter Leupold