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121
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BMCBI
2006
143views more  BMCBI 2006»
15 years 25 days ago
Fast estimation of the difference between two PAM/JTT evolutionary distances in triplets of homologous sequences
Background: The estimation of the difference between two evolutionary distances within a triplet of homologs is a common operation that is used for example to determine which of t...
Christophe Dessimoz, Manuel Gil, Adrian Schneider,...
86
Voted
BMCBI
2007
113views more  BMCBI 2007»
15 years 23 days ago
PILER-CR: Fast and accurate identification of CRISPR repeats
Background: Sequencing of prokaryotic genomes has recently revealed the presence of CRISPR elements: short, highly conserved repeats separated by unique sequences of similar lengt...
Robert C. Edgar
CN
2007
132views more  CN 2007»
15 years 23 days ago
FluNet: A hybrid internet simulator for fast queue regimes
Motivated by the scale and complexity of simulating large-scale networks, recent research has focused on hybrid fluid/packet simulators, where fluid models are combined with pac...
Yung Yi, Sanjay Shakkottai
97
Voted
BMCBI
2005
112views more  BMCBI 2005»
15 years 20 days ago
Vector analysis as a fast and easy method to compare gene expression responses between different experimental backgrounds
Background: Gene expression studies increasingly compare expression responses between different experimental backgrounds (genetic, physiological, or phylogenetic). By focusing on ...
Rainer Breitling, Patrick Armengaud, Anna Amtmann
135
Voted
BMCBI
2004
156views more  BMCBI 2004»
15 years 19 days ago
DIALIGN P: Fast pair-wise and multiple sequence alignment using parallel processors
Background: Parallel computing is frequently used to speed up computationally expensive tasks in Bioinformatics. Results: Herein, a parallel version of the multi-alignment program...
Martin Schmollinger, Kay Nieselt, Michael Kaufmann...