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    BMCBI
    2005
    126views more  BMCBI 2005»
    Integrative analysis of multiple gene expression profiles with quality-adjusted effect size models
    14 years 9 months ago
    Integrative analysis of multiple gene expression profiles with quality-adjusted effect size models
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    Background: With the explosion of microarray studies, an enormous amount of data is being produced. Systematic integration of gene expression data from different sources increases...
    Pingzhao Hu, Celia M. T. Greenwood, Joseph Beyene
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    BMCBI
    2005
    190views more  BMCBI 2005»
    Species-specific analysis of protein sequence motifs using mutual information
    14 years 9 months ago
    Species-specific analysis of protein sequence motifs using mutual information
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    Background: Protein sequence motifs are by definition short fragments of conserved amino acids, often associated with a specific function. Accordingly protein sequence profiles de...
    Jan Hummel, Nima Keshvari, Wolfram Weckwerth, Joac...
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    BMCBI
    2005
    73views more  BMCBI 2005»
    An analysis of extensible modelling for functional genomics data
    14 years 9 months ago
    An analysis of extensible modelling for functional genomics data
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    Background: Several data formats have been developed for large scale biological experiments, using a variety of methodologies. Most data formats contain a mechanism for allowing e...
    Andrew R. Jones, Norman W. Paton
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    BMCBI
    2005
    136views more  BMCBI 2005»
    Automatic detection of false annotations via binary property clustering
    14 years 9 months ago
    Automatic detection of false annotations via binary property clustering
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    Background: Computational protein annotation methods occasionally introduce errors. Falsepositive (FP) errors are annotations that are mistakenly associated with a protein. Such f...
    Noam Kaplan, Michal Linial
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    BMCBI
    2005
    94views more  BMCBI 2005»
    Measuring similarities between transcription factor binding sites
    14 years 9 months ago
    Measuring similarities between transcription factor binding sites
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    Background: Collections of transcription factor binding profiles (Transfac, Jaspar) are essential to identify regulatory elements in DNA sequences. Subsets of highly similar profi...
    Szymon M. Kielbasa, Didier Gonze, Hanspeter Herzel
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