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99
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BMCBI
2010
98views more  BMCBI 2010»
15 years 21 days ago
miRMaid: a unified programming interface for microRNA data resources
Background: MicroRNAs (miRNAs) are endogenous small RNAs that play a key role in post-transcriptional regulation of gene expression in animals and plants. The number of known miRN...
Anders Jacobsen, Anders Krogh, Sakari Kauppinen, M...
122
Voted
BMCBI
2010
240views more  BMCBI 2010»
15 years 21 days ago
TAM: A method for enrichment and depletion analysis of a microRNA category in a list of microRNAs
Background: MicroRNAs (miRNAs) are a class of important gene regulators. The number of identified miRNAs has been increasing dramatically in recent years. An emerging major challe...
Ming Lu, Bing Shi, Juan Wang, Qun Cao, Qinghua Cui
106
Voted
BMCBI
2010
117views more  BMCBI 2010»
15 years 21 days ago
Automatic, context-specific generation of Gene Ontology slims
Background: The use of ontologies to control vocabulary and structure annotation has added value to genomescale data, and contributed to the capture and re-use of knowledge across...
Melissa J. Davis, Muhammad Shoaib B. Sehgal, Mark ...
88
Voted
BMCBI
2010
70views more  BMCBI 2010»
15 years 21 days ago
The Text-mining based PubChem Bioassay neighboring analysis
Background: In recent years, the number of High Throughput Screening (HTS) assays deposited in PubChem has grown quickly. As a result, the volume of both the structured informatio...
Lianyi Han, Tugba O. Suzek, Yanli Wang, Steve H. B...
119
Voted
JACM
2010
120views more  JACM 2010»
14 years 7 months ago
The structure of inverses in schema mappings
A schema mapping is a specification that describes how data structured under one schema (the source schema) is to be transformed into data structured under a different schema (the...
Ronald Fagin, Alan Nash