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BMCBI
2010
175views more  BMCBI 2010»
15 years 21 days ago
Saliva Ontology: An ontology-based framework for a Salivaomics Knowledge Base
Background: The Salivaomics Knowledge Base (SKB) is designed to serve as a computational infrastructure that can permit global exploration and utilization of data and information ...
Jiye Ai, Barry Smith, Wong T. David
133
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BMCBI
2010
150views more  BMCBI 2010»
15 years 21 days ago
Systematic calibration of a cell signaling network model
Background: Mathematical modeling is being applied to increasingly complex biological systems and datasets; however, the process of analyzing and calibrating against experimental ...
Kyoung Ae Kim, Sabrina L. Spencer, John G. Albeck,...
109
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BMCBI
2010
153views more  BMCBI 2010»
15 years 21 days ago
Automatic symptom name normalization in clinical records of traditional Chinese medicine
Background: In recent years, Data Mining technology has been applied more than ever before in the field of traditional Chinese medicine (TCM) to discover regularities from the exp...
Yaqiang Wang, Zhonghua Yu, Yongguang Jiang, Kaikuo...
103
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BMCBI
2010
172views more  BMCBI 2010»
15 years 21 days ago
Accessing the SEED genome databases via Web services API: tools for programmers
Background: The SEED integrates many publicly available genome sequences into a single resource. The database contains accurate and up-to-date annotations based on the subsystems ...
Terry Disz, Sajia Akhter, Daniel Cuevas, Robert Ol...
BMCBI
2010
214views more  BMCBI 2010»
15 years 21 days ago
AutoSOME: a clustering method for identifying gene expression modules without prior knowledge of cluster number
Background: Clustering the information content of large high-dimensional gene expression datasets has widespread application in "omics" biology. Unfortunately, the under...
Aaron M. Newman, James B. Cooper