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IPPS
2008
IEEE
15 years 4 months ago
Introducing gravel: An MPI companion library
A non-trivial challenge in high performance, cluster computing is the communication overhead introduced by the cluster interconnect. A common strategy for addressing this challeng...
Anthony Danalis, Aaron Brown, Lori L. Pollock, D. ...
IPPS
2008
IEEE
15 years 4 months ago
On synthesizing workloads emulating MPI applications
Evaluation of high performance parallel systems is a delicate issue, due to the difficulty of generating workloads that represent, with fidelity, those that will run on actual sys...
Javier Navaridas, José Miguel-Alonso, Franc...
IPPS
2008
IEEE
15 years 4 months ago
Design of steering vectors for dynamically reconfigurable architectures
An architectural framework is studied that can perform dynamic reconfiguration. A basic objective is to dynamically reconfigure the architecture so that its configuration is well ...
Nick A. Mould, Brian F. Veale, John K. Antonio, Mo...
IPPS
2008
IEEE
15 years 4 months ago
Performance comparison of SGI Altix 4700 and SGI Altix 3700 Bx2
Suitability of the next generation of high-performance computing systems for petascale simulations will depend on a balance between factors such as processor performance, memory p...
Subhash Saini, Dennis C. Jespersen, Dale Talcott, ...
IPPS
2008
IEEE
15 years 4 months ago
Adaptive Locality-Effective Kernel Machine for protein phosphorylation site prediction
In this study, we propose a new machine learning model namely, Adaptive Locality-Effective Kernel Machine (Adaptive-LEKM) for protein phosphorylation site prediction. Adaptive-LEK...
Paul D. Yoo, Yung Shwen Ho, Bing Bing Zhou, Albert...